Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 AC100757.3-201ENST00000622361 1406 ntBASIC17.12■□□□□ 0.33
COBLL1Q53SF7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 AC012508.2-201ENST00000567613 1472 ntBASIC17.12■□□□□ 0.33
COBLL1Q53SF7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COBLL1Q53SF7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 AL390755.1-201ENST00000623716 2027 ntBASIC17.11■□□□□ 0.33
COBLL1Q53SF7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 BTBD7P1-201ENST00000447253 1453 ntBASIC17.11■□□□□ 0.33
COBLL1Q53SF7 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.11■□□□□ 0.33
COBLL1Q53SF7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
COBLL1Q53SF7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COBLL1Q53SF7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 REXO1L4P-201ENST00000605109 1937 ntBASIC17.09■□□□□ 0.33
COBLL1Q53SF7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 GAPDHP40-201ENST00000505218 1006 ntBASIC17.09■□□□□ 0.33
COBLL1Q53SF7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.09■□□□□ 0.33
COBLL1Q53SF7 AC004461.2-201ENST00000629517 803 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms