Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.37■□□□□ 0.85
COL16A1Q07092 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.37■□□□□ 0.85
COL16A1Q07092 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
COL16A1Q07092 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.37■□□□□ 0.85
COL16A1Q07092 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
COL16A1Q07092 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.37■□□□□ 0.85
COL16A1Q07092 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
COL16A1Q07092 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC20.37■□□□□ 0.85
COL16A1Q07092 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC20.37■□□□□ 0.85
COL16A1Q07092 AC055811.3-201ENST00000584952 686 ntBASIC20.37■□□□□ 0.85
COL16A1Q07092 AC007326.1-201ENST00000604539 458 ntBASIC20.37■□□□□ 0.85
COL16A1Q07092 AC011471.3-201ENST00000623576 402 ntBASIC20.37■□□□□ 0.85
COL16A1Q07092 AL451007.2-201ENST00000632004 563 ntBASIC20.37■□□□□ 0.85
COL16A1Q07092 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 AC006449.6-201ENST00000612330 2296 ntBASIC20.37■□□□□ 0.85
COL16A1Q07092 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL16A1Q07092 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.36■□□□□ 0.85
COL16A1Q07092 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 HNRNPA1P58-201ENST00000403629 610 ntBASIC20.36■□□□□ 0.85
COL16A1Q07092 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC20.36■□□□□ 0.85
COL16A1Q07092 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.36■□□□□ 0.85
COL16A1Q07092 HMGB1P24-201ENST00000611897 328 ntBASIC20.36■□□□□ 0.85
COL16A1Q07092 AC009560.1-201ENST00000620208 434 ntBASIC20.36■□□□□ 0.85
COL16A1Q07092 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.36■□□□□ 0.85
COL16A1Q07092 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL16A1Q07092 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.35■□□□□ 0.85
COL16A1Q07092 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL16A1Q07092 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC20.35■□□□□ 0.85
COL16A1Q07092 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL16A1Q07092 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.35■□□□□ 0.85
COL16A1Q07092 MT3-203ENST00000565838 421 ntTSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC20.35■□□□□ 0.85
COL16A1Q07092 AL139339.2-201ENST00000608063 657 ntBASIC20.35■□□□□ 0.85
COL16A1Q07092 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL16A1Q07092 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.35■□□□□ 0.85
COL16A1Q07092 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.35■□□□□ 0.85
COL16A1Q07092 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.35■□□□□ 0.85
COL16A1Q07092 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 AC018629.1-201ENST00000623381 1736 ntBASIC20.35■□□□□ 0.85
COL16A1Q07092 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC20.35■□□□□ 0.85
COL16A1Q07092 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL16A1Q07092 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL16A1Q07092 IGHEP1-201ENST00000521393 651 ntBASIC20.35■□□□□ 0.85
COL16A1Q07092 FAM86B3P-203ENST00000523992 854 ntBASIC20.35■□□□□ 0.85
COL16A1Q07092 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COL16A1Q07092 RPS5-204ENST00000598098 536 ntTSL 2 BASIC20.35■□□□□ 0.85
COL16A1Q07092 AC009884.2-201ENST00000603110 324 ntBASIC20.35■□□□□ 0.85
COL16A1Q07092 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC20.35■□□□□ 0.85
COL16A1Q07092 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL16A1Q07092 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL16A1Q07092 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL16A1Q07092 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.34■□□□□ 0.85
COL16A1Q07092 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
COL16A1Q07092 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.34■□□□□ 0.85
COL16A1Q07092 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms