Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.24■□□□□ 0.03
YBX1P67809 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 GNAQP1-201ENST00000444815 1067 ntBASIC15.24■□□□□ 0.03
YBX1P67809 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.24■□□□□ 0.03
YBX1P67809 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.24■□□□□ 0.03
YBX1P67809 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 ZNF890P-202ENST00000530367 1156 ntBASIC15.24■□□□□ 0.03
YBX1P67809 AC135586.1-201ENST00000539323 574 ntBASIC15.24■□□□□ 0.03
YBX1P67809 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.24■□□□□ 0.03
YBX1P67809 RN7SL204P-201ENST00000582831 262 ntBASIC15.24■□□□□ 0.03
YBX1P67809 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.24■□□□□ 0.03
YBX1P67809 AC011467.4-201ENST00000594891 528 ntBASIC15.24■□□□□ 0.03
YBX1P67809 AJ011932.1-201ENST00000621707 465 ntBASIC15.24■□□□□ 0.03
YBX1P67809 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.24■□□□□ 0.03
YBX1P67809 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.24■□□□□ 0.03
YBX1P67809 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
YBX1P67809 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.24■□□□□ 0.03
YBX1P67809 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YBX1P67809 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
YBX1P67809 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 AC236430.1-201ENST00000402231 743 ntBASIC15.23■□□□□ 0.03
YBX1P67809 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 AC114501.2-201ENST00000439631 535 ntBASIC15.23■□□□□ 0.03
YBX1P67809 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.23■□□□□ 0.03
YBX1P67809 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 SERBP1P5-201ENST00000510079 1181 ntBASIC15.23■□□□□ 0.03
YBX1P67809 SDHAP3-202ENST00000515467 728 ntBASIC15.23■□□□□ 0.03
YBX1P67809 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 AC104794.3-201ENST00000566840 1248 ntBASIC15.23■□□□□ 0.03
YBX1P67809 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.23■□□□□ 0.03
YBX1P67809 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
YBX1P67809 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
YBX1P67809 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YBX1P67809 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YBX1P67809 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YBX1P67809 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YBX1P67809 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YBX1P67809 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
YBX1P67809 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms