Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 DUX4L17-201ENST00000557360 1267 ntBASIC12.25□□□□□ -0.45
RAB5BP61020 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.25□□□□□ -0.45
RAB5BP61020 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.25□□□□□ -0.45
RAB5BP61020 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 DGCR10-201ENST00000609839 495 ntBASIC12.25□□□□□ -0.45
RAB5BP61020 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RAB5BP61020 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 AL023875.1-201ENST00000640777 796 ntBASIC12.25□□□□□ -0.45
RAB5BP61020 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 MIR497HG-202ENST00000572453 3838 ntBASIC12.24□□□□□ -0.45
RAB5BP61020 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
RAB5BP61020 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
RAB5BP61020 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.24□□□□□ -0.45
RAB5BP61020 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.24□□□□□ -0.45
RAB5BP61020 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 AOC4P-203ENST00000566825 2289 ntBASIC12.24□□□□□ -0.45
RAB5BP61020 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 AC023090.2-201ENST00000625182 2110 ntBASIC12.24□□□□□ -0.45
RAB5BP61020 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.24□□□□□ -0.45
RAB5BP61020 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.24□□□□□ -0.45
RAB5BP61020 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RAB5BP61020 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB5BP61020 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms