Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC011477.6-201ENST00000604980 1927 ntBASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 LINC01230-201ENST00000625222 3017 ntBASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 KRT18P1-202ENST00000452408 1331 ntBASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AC090616.6-201ENST00000582640 721 ntBASIC12.24□□□□□ -0.45
ERVFC1-1P60608 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 NPAP1P7-201ENST00000613027 823 ntBASIC12.24□□□□□ -0.45
ERVFC1-1P60608 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ERVFC1-1P60608 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 AC148477.4-201ENST00000613430 1793 ntBASIC12.23□□□□□ -0.45
ERVFC1-1P60608 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
ERVFC1-1P60608 AC126365.1-201ENST00000578585 1514 ntBASIC12.23□□□□□ -0.45
ERVFC1-1P60608 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms