Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PPP4CP60510 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.29■□□□□ 0.52
PPP4CP60510 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP4CP60510 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PPP4CP60510 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 HLA-K-203ENST00000430151 1046 ntBASIC18.29■□□□□ 0.52
PPP4CP60510 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 AL590640.2-201ENST00000457038 527 ntBASIC18.29■□□□□ 0.52
PPP4CP60510 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP4CP60510 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.29■□□□□ 0.52
PPP4CP60510 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP4CP60510 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.29■□□□□ 0.52
PPP4CP60510 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PPP4CP60510 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP4CP60510 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PPP4CP60510 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP4CP60510 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.29■□□□□ 0.52
PPP4CP60510 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP4CP60510 LRRC59-203ENST00000576448 1531 ntBASIC18.28■□□□□ 0.52
PPP4CP60510 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PPP4CP60510 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.28■□□□□ 0.52
PPP4CP60510 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PPP4CP60510 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.28■□□□□ 0.52
PPP4CP60510 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP4CP60510 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PPP4CP60510 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.28■□□□□ 0.52
PPP4CP60510 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PPP4CP60510 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 GHSR-202ENST00000427970 912 ntBASIC18.28■□□□□ 0.52
PPP4CP60510 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP4CP60510 AC022616.1-201ENST00000518688 554 ntBASIC18.28■□□□□ 0.52
PPP4CP60510 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC18.28■□□□□ 0.52
PPP4CP60510 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.28■□□□□ 0.52
PPP4CP60510 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.28■□□□□ 0.52
PPP4CP60510 DUX4L47-201ENST00000566374 394 ntBASIC18.28■□□□□ 0.52
PPP4CP60510 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 ENPP7P14-201ENST00000621765 1040 ntBASIC18.28■□□□□ 0.52
PPP4CP60510 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PPP4CP60510 OR6D1P-203ENST00000641209 4860 ntBASIC18.28■□□□□ 0.52
PPP4CP60510 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PPP4CP60510 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP4CP60510 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP4CP60510 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PPP4CP60510 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 AC092850.2-201ENST00000623821 2697 ntBASIC18.27■□□□□ 0.52
PPP4CP60510 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PPP4CP60510 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
PPP4CP60510 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PPP4CP60510 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.27■□□□□ 0.52
PPP4CP60510 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP4CP60510 TPM3P8-201ENST00000330554 643 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms