Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.37■□□□□ 0.85
RIPK4P57078 AC105917.1-201ENST00000506637 2539 ntBASIC20.37■□□□□ 0.85
RIPK4P57078 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.37■□□□□ 0.85
RIPK4P57078 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.37■□□□□ 0.85
RIPK4P57078 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.37■□□□□ 0.85
RIPK4P57078 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.37■□□□□ 0.85
RIPK4P57078 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
RIPK4P57078 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.37■□□□□ 0.85
RIPK4P57078 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.37■□□□□ 0.85
RIPK4P57078 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.37■□□□□ 0.85
RIPK4P57078 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.37■□□□□ 0.85
RIPK4P57078 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
RIPK4P57078 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 SSR4P1-203ENST00000599569 2260 ntBASIC20.37■□□□□ 0.85
RIPK4P57078 AC087481.3-201ENST00000602886 1894 ntBASIC20.37■□□□□ 0.85
RIPK4P57078 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.37■□□□□ 0.85
RIPK4P57078 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RIPK4P57078 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RIPK4P57078 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK4P57078 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RIPK4P57078 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RIPK4P57078 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.36■□□□□ 0.85
RIPK4P57078 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 SOCS2P1-201ENST00000417727 557 ntBASIC20.36■□□□□ 0.85
RIPK4P57078 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.36■□□□□ 0.85
RIPK4P57078 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 KRT17P7-201ENST00000451704 1104 ntBASIC20.36■□□□□ 0.85
RIPK4P57078 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 AC010319.3-201ENST00000597028 470 ntBASIC20.36■□□□□ 0.85
RIPK4P57078 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.36■□□□□ 0.85
RIPK4P57078 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.36■□□□□ 0.85
RIPK4P57078 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK4P57078 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK4P57078 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK4P57078 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.35■□□□□ 0.85
RIPK4P57078 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.35■□□□□ 0.85
RIPK4P57078 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK4P57078 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RIPK4P57078 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.35■□□□□ 0.85
RIPK4P57078 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RIPK4P57078 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK4P57078 AC068418.2-201ENST00000577309 3703 ntBASIC20.35■□□□□ 0.85
RIPK4P57078 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.35■□□□□ 0.85
RIPK4P57078 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK4P57078 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK4P57078 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK4P57078 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK4P57078 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
RIPK4P57078 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.35■□□□□ 0.85
RIPK4P57078 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.35■□□□□ 0.85
RIPK4P57078 AL162726.2-201ENST00000438986 1017 ntBASIC20.35■□□□□ 0.85
RIPK4P57078 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.35■□□□□ 0.85
RIPK4P57078 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.35■□□□□ 0.85
RIPK4P57078 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.35■□□□□ 0.85
RIPK4P57078 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms