Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH13P55290 MIR4469-201ENST00000583919 79 ntBASIC15.34■□□□□ 0.05
CDH13P55290 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 AC003101.2-201ENST00000612557 442 ntBASIC15.34■□□□□ 0.05
CDH13P55290 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 AL513210.1-201ENST00000629608 234 ntBASIC15.34■□□□□ 0.05
CDH13P55290 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CDH13P55290 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH13P55290 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH13P55290 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH13P55290 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH13P55290 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
CDH13P55290 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH13P55290 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH13P55290 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH13P55290 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH13P55290 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH13P55290 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH13P55290 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH13P55290 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH13P55290 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDH13P55290 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH13P55290 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH13P55290 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH13P55290 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH13P55290 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH13P55290 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDH13P55290 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH13P55290 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH13P55290 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH13P55290 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH13P55290 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH13P55290 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH13P55290 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH13P55290 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH13P55290 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH13P55290 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH13P55290 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH13P55290 AL627223.1-201ENST00000416693 442 ntBASIC15.32■□□□□ 0.04
CDH13P55290 GPS2P2-201ENST00000430745 888 ntBASIC15.32■□□□□ 0.04
CDH13P55290 RBPMS2P1-201ENST00000437762 623 ntBASIC15.32■□□□□ 0.04
CDH13P55290 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH13P55290 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH13P55290 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH13P55290 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH13P55290 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms