Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN2DP55273 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDKN2DP55273 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDKN2DP55273 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.44■□□□□ 0.06
CDKN2DP55273 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN2DP55273 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.44■□□□□ 0.06
CDKN2DP55273 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.44■□□□□ 0.06
CDKN2DP55273 RPL5P21-201ENST00000404620 815 ntBASIC15.44■□□□□ 0.06
CDKN2DP55273 AC092580.3-201ENST00000430932 139 ntBASIC15.44■□□□□ 0.06
CDKN2DP55273 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN2DP55273 AC069120.2-201ENST00000524091 540 ntBASIC15.44■□□□□ 0.06
CDKN2DP55273 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.44■□□□□ 0.06
CDKN2DP55273 AC015911.4-201ENST00000588022 1070 ntBASIC15.44■□□□□ 0.06
CDKN2DP55273 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.44■□□□□ 0.06
CDKN2DP55273 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.44■□□□□ 0.06
CDKN2DP55273 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.44■□□□□ 0.06
CDKN2DP55273 AL109936.8-201ENST00000641772 604 ntBASIC15.44■□□□□ 0.06
CDKN2DP55273 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CDKN2DP55273 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDKN2DP55273 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.44■□□□□ 0.06
CDKN2DP55273 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDKN2DP55273 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CDKN2DP55273 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.43■□□□□ 0.06
CDKN2DP55273 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.43■□□□□ 0.06
CDKN2DP55273 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CDKN2DP55273 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDKN2DP55273 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 AC015922.1-201ENST00000421102 1152 ntBASIC15.43■□□□□ 0.06
CDKN2DP55273 AC107890.1-201ENST00000422478 521 ntBASIC15.43■□□□□ 0.06
CDKN2DP55273 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 RN7SL618P-201ENST00000477850 296 ntBASIC15.43■□□□□ 0.06
CDKN2DP55273 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.43■□□□□ 0.06
CDKN2DP55273 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.43■□□□□ 0.06
CDKN2DP55273 AC027369.6-201ENST00000525520 931 ntBASIC15.43■□□□□ 0.06
CDKN2DP55273 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.43■□□□□ 0.06
CDKN2DP55273 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.43■□□□□ 0.06
CDKN2DP55273 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.43■□□□□ 0.06
CDKN2DP55273 AC015910.1-201ENST00000579400 975 ntBASIC15.43■□□□□ 0.06
CDKN2DP55273 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.43■□□□□ 0.06
CDKN2DP55273 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.43■□□□□ 0.06
CDKN2DP55273 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDKN2DP55273 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
CDKN2DP55273 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.42■□□□□ 0.06
CDKN2DP55273 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.42■□□□□ 0.06
CDKN2DP55273 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 MROH4P-201ENST00000431302 1578 ntBASIC15.42■□□□□ 0.06
CDKN2DP55273 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDKN2DP55273 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDKN2DP55273 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.42■□□□□ 0.06
CDKN2DP55273 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDKN2DP55273 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.42■□□□□ 0.06
CDKN2DP55273 AC140878.1-201ENST00000565277 250 ntBASIC15.42■□□□□ 0.06
CDKN2DP55273 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.42■□□□□ 0.06
CDKN2DP55273 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.42■□□□□ 0.06
CDKN2DP55273 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.42■□□□□ 0.06
CDKN2DP55273 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.42■□□□□ 0.06
CDKN2DP55273 AC074044.1-201ENST00000609673 707 ntBASIC15.42■□□□□ 0.06
CDKN2DP55273 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDKN2DP55273 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms