Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AC013268.4-201ENST00000637413 2228 ntBASIC17.04■□□□□ 0.32
NCKAP1LP55160 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.03■□□□□ 0.32
NCKAP1LP55160 AC092384.3-202ENST00000564646 2873 ntBASIC17.03■□□□□ 0.32
NCKAP1LP55160 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.03■□□□□ 0.32
NCKAP1LP55160 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 AC126365.1-201ENST00000578585 1514 ntBASIC17.03■□□□□ 0.32
NCKAP1LP55160 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKAP1LP55160 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.03■□□□□ 0.32
NCKAP1LP55160 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 GHSR-202ENST00000427970 912 ntBASIC17.02■□□□□ 0.32
NCKAP1LP55160 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKAP1LP55160 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.02■□□□□ 0.32
NCKAP1LP55160 AC073347.1-201ENST00000421633 2643 ntBASIC17.02■□□□□ 0.32
NCKAP1LP55160 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 KRT8P22-201ENST00000562317 1415 ntBASIC17.02■□□□□ 0.31
NCKAP1LP55160 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.02■□□□□ 0.31
NCKAP1LP55160 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.02■□□□□ 0.31
NCKAP1LP55160 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKAP1LP55160 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCKAP1LP55160 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms