Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
EPHA4P54764 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.03■□□□□ -0
EPHA4P54764 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
EPHA4P54764 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.03■□□□□ -0
EPHA4P54764 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 AC104989.1-201ENST00000519711 778 ntBASIC15.03■□□□□ -0
EPHA4P54764 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.03■□□□□ -0
EPHA4P54764 AP001889.1-201ENST00000525414 633 ntBASIC15.03■□□□□ -0
EPHA4P54764 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.03■□□□□ -0
EPHA4P54764 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
EPHA4P54764 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 COX11-210ENST00000639671 696 ntBASIC15.03■□□□□ -0
EPHA4P54764 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.03■□□□□ -0
EPHA4P54764 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.03■□□□□ -0
EPHA4P54764 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
EPHA4P54764 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.03■□□□□ -0
EPHA4P54764 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
EPHA4P54764 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
EPHA4P54764 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.03■□□□□ -0
EPHA4P54764 AL662844.4-201ENST00000606367 2838 ntBASIC15.02■□□□□ -0
EPHA4P54764 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.02■□□□□ -0
EPHA4P54764 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.02■□□□□ -0
EPHA4P54764 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 RPS2P32-201ENST00000439199 892 ntBASIC15.02■□□□□ -0
EPHA4P54764 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.02■□□□□ -0
EPHA4P54764 KRT223P-202ENST00000449164 1292 ntBASIC15.02■□□□□ -0
EPHA4P54764 CROCCP4-201ENST00000457096 498 ntBASIC15.02■□□□□ -0
EPHA4P54764 AC022137.2-201ENST00000503482 481 ntBASIC15.02■□□□□ -0
EPHA4P54764 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.02■□□□□ -0
EPHA4P54764 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
EPHA4P54764 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.02■□□□□ -0
EPHA4P54764 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.02■□□□□ -0
EPHA4P54764 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.02■□□□□ -0
EPHA4P54764 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.02■□□□□ -0
EPHA4P54764 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
EPHA4P54764 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
EPHA4P54764 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.02□□□□□ -0.01
EPHA4P54764 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.02□□□□□ -0.01
EPHA4P54764 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 AC008741.2-201ENST00000612792 3115 ntBASIC15.02□□□□□ -0.01
EPHA4P54764 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
EPHA4P54764 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
EPHA4P54764 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.02□□□□□ -0.01
EPHA4P54764 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
EPHA4P54764 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
EPHA4P54764 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
EPHA4P54764 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms