Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AC092127.1-201ENST00000567093 3455 ntBASIC18.36■□□□□ 0.53
CACNB3P54284 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CACNB3P54284 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 AC024909.3-201ENST00000611513 2257 ntBASIC18.35■□□□□ 0.53
CACNB3P54284 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 AC114812.1-204ENST00000449669 728 ntBASIC18.35■□□□□ 0.53
CACNB3P54284 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.35■□□□□ 0.53
CACNB3P54284 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 ACTG1P17-201ENST00000558391 1119 ntBASIC18.35■□□□□ 0.53
CACNB3P54284 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.35■□□□□ 0.53
CACNB3P54284 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNB3P54284 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNB3P54284 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CACNB3P54284 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNB3P54284 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CACNB3P54284 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CACNB3P54284 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNB3P54284 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CACNB3P54284 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 TPM3P8-201ENST00000330554 643 ntBASIC18.34■□□□□ 0.53
CACNB3P54284 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CACNB3P54284 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNB3P54284 IGHJ2P-201ENST00000454480 60 ntBASIC18.34■□□□□ 0.53
CACNB3P54284 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.34■□□□□ 0.53
CACNB3P54284 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.34■□□□□ 0.53
CACNB3P54284 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 EEF1DP1-201ENST00000585891 896 ntBASIC18.34■□□□□ 0.53
CACNB3P54284 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNB3P54284 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.34■□□□□ 0.53
CACNB3P54284 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNB3P54284 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CACNB3P54284 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 AL158070.2-201ENST00000623713 1621 ntBASIC18.34■□□□□ 0.53
CACNB3P54284 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNB3P54284 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNB3P54284 LRRC59-203ENST00000576448 1531 ntBASIC18.33■□□□□ 0.53
CACNB3P54284 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNB3P54284 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNB3P54284 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CACNB3P54284 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNB3P54284 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNB3P54284 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.33■□□□□ 0.53
CACNB3P54284 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CACNB3P54284 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms