Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCNKBP51801 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCNKBP51801 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCNKBP51801 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCNKBP51801 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCNKBP51801 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCNKBP51801 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLCNKBP51801 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCNKBP51801 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCNKBP51801 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCNKBP51801 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCNKBP51801 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCNKBP51801 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCNKBP51801 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
CLCNKBP51801 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.59■□□□□ 0.25
CLCNKBP51801 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.59■□□□□ 0.25
CLCNKBP51801 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCNKBP51801 AC099336.1-201ENST00000417053 1171 ntBASIC16.59■□□□□ 0.25
CLCNKBP51801 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCNKBP51801 AP000812.2-201ENST00000538934 718 ntBASIC16.59■□□□□ 0.25
CLCNKBP51801 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCNKBP51801 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCNKBP51801 AL033527.4-201ENST00000641026 673 ntBASIC16.59■□□□□ 0.25
CLCNKBP51801 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCNKBP51801 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCNKBP51801 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCNKBP51801 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCNKBP51801 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCNKBP51801 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCNKBP51801 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CLCNKBP51801 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCNKBP51801 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCNKBP51801 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 AL365203.3-201ENST00000609742 2057 ntBASIC16.58■□□□□ 0.25
CLCNKBP51801 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCNKBP51801 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CLCNKBP51801 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CLCNKBP51801 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.58■□□□□ 0.25
CLCNKBP51801 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.58■□□□□ 0.25
CLCNKBP51801 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCNKBP51801 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCNKBP51801 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCNKBP51801 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLCNKBP51801 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCNKBP51801 HLA-V-201ENST00000429037 534 ntBASIC16.58■□□□□ 0.24
CLCNKBP51801 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.58■□□□□ 0.24
CLCNKBP51801 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
CLCNKBP51801 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.58■□□□□ 0.24
CLCNKBP51801 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCNKBP51801 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCNKBP51801 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.58■□□□□ 0.24
CLCNKBP51801 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.58■□□□□ 0.24
CLCNKBP51801 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCNKBP51801 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCNKBP51801 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCNKBP51801 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCNKBP51801 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCNKBP51801 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCNKBP51801 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCNKBP51801 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCNKBP51801 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCNKBP51801 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCNKBP51801 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
CLCNKBP51801 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCNKBP51801 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCNKBP51801 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
CLCNKBP51801 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCNKBP51801 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCNKBP51801 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLCNKBP51801 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCNKBP51801 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCNKBP51801 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCNKBP51801 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCNKBP51801 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCNKBP51801 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms