Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.9□□□□□ -0.18
LHX2P50458 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.9□□□□□ -0.18
LHX2P50458 AC068587.3-201ENST00000526613 355 ntBASIC13.9□□□□□ -0.18
LHX2P50458 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LHX2P50458 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 HILS1-202ENST00000545329 423 ntBASIC13.9□□□□□ -0.18
LHX2P50458 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.9□□□□□ -0.18
LHX2P50458 AC233724.13-201ENST00000598383 410 ntBASIC13.9□□□□□ -0.18
LHX2P50458 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.9□□□□□ -0.18
LHX2P50458 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.9□□□□□ -0.18
LHX2P50458 AC092850.2-201ENST00000623821 2697 ntBASIC13.9□□□□□ -0.18
LHX2P50458 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.9□□□□□ -0.18
LHX2P50458 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.9□□□□□ -0.18
LHX2P50458 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LHX2P50458 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LHX2P50458 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LHX2P50458 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
LHX2P50458 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.89□□□□□ -0.19
LHX2P50458 ACKR1-201ENST00000368121 1240 ntBASIC13.89□□□□□ -0.19
LHX2P50458 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 AC093433.1-201ENST00000458048 571 ntBASIC13.89□□□□□ -0.19
LHX2P50458 ACA64.2-201ENST00000459014 129 ntBASIC13.89□□□□□ -0.19
LHX2P50458 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.89□□□□□ -0.19
LHX2P50458 AP001582.1-201ENST00000525856 295 ntBASIC13.89□□□□□ -0.19
LHX2P50458 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.89□□□□□ -0.19
LHX2P50458 RAB43P1-201ENST00000561790 589 ntBASIC13.89□□□□□ -0.19
LHX2P50458 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.89□□□□□ -0.19
LHX2P50458 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
LHX2P50458 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.89□□□□□ -0.19
LHX2P50458 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.89□□□□□ -0.19
LHX2P50458 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LHX2P50458 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.88□□□□□ -0.19
LHX2P50458 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 AC103702.1-201ENST00000548801 2630 ntBASIC13.88□□□□□ -0.19
LHX2P50458 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.88□□□□□ -0.19
LHX2P50458 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.88□□□□□ -0.19
LHX2P50458 AC018665.1-201ENST00000622927 1362 ntBASIC13.88□□□□□ -0.19
LHX2P50458 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LHX2P50458 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LHX2P50458 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms