Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.34■□□□□ 0.53
MRE11P49959 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 SBF1P1-201ENST00000444527 5631 ntBASIC18.34■□□□□ 0.53
MRE11P49959 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 OR8S1-201ENST00000310194 1080 ntBASIC18.34■□□□□ 0.53
MRE11P49959 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MRE11P49959 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.34■□□□□ 0.53
MRE11P49959 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.34■□□□□ 0.53
MRE11P49959 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.34■□□□□ 0.53
MRE11P49959 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.34■□□□□ 0.53
MRE11P49959 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.34■□□□□ 0.53
MRE11P49959 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 U82695.1-201ENST00000635752 1889 ntBASIC18.34■□□□□ 0.53
MRE11P49959 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.34■□□□□ 0.53
MRE11P49959 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.34■□□□□ 0.53
MRE11P49959 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.34■□□□□ 0.53
MRE11P49959 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRE11P49959 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.33■□□□□ 0.53
MRE11P49959 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MRE11P49959 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MRE11P49959 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC18.33■□□□□ 0.53
MRE11P49959 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
MRE11P49959 AL590787.1-201ENST00000568856 1315 ntBASIC18.33■□□□□ 0.53
MRE11P49959 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRE11P49959 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRE11P49959 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
MRE11P49959 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
MRE11P49959 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRE11P49959 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRE11P49959 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
MRE11P49959 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.33■□□□□ 0.52
MRE11P49959 AL020989.1-201ENST00000422979 469 ntBASIC18.33■□□□□ 0.52
MRE11P49959 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.33■□□□□ 0.52
MRE11P49959 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.33■□□□□ 0.52
MRE11P49959 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.33■□□□□ 0.52
MRE11P49959 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.33■□□□□ 0.52
MRE11P49959 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.33■□□□□ 0.52
MRE11P49959 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MRE11P49959 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRE11P49959 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MRE11P49959 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC18.33■□□□□ 0.52
MRE11P49959 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRE11P49959 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.33■□□□□ 0.52
MRE11P49959 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRE11P49959 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.33■□□□□ 0.52
MRE11P49959 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
MRE11P49959 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.32■□□□□ 0.52
MRE11P49959 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MRE11P49959 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC18.32■□□□□ 0.52
MRE11P49959 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MRE11P49959 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MRE11P49959 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC18.32■□□□□ 0.52
MRE11P49959 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MRE11P49959 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.32■□□□□ 0.52
MRE11P49959 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MRE11P49959 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.32■□□□□ 0.52
MRE11P49959 TSEN15P1-201ENST00000423257 515 ntBASIC18.32■□□□□ 0.52
MRE11P49959 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
MRE11P49959 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.32■□□□□ 0.52
MRE11P49959 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.32■□□□□ 0.52
MRE11P49959 CYP2A7P1-201ENST00000595391 815 ntBASIC18.32■□□□□ 0.52
MRE11P49959 AC027612.4-201ENST00000605371 583 ntBASIC18.32■□□□□ 0.52
MRE11P49959 AC008735.5-201ENST00000623544 497 ntBASIC18.32■□□□□ 0.52
MRE11P49959 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms