Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNFSF9P41273 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFSF9P41273 GIMAP3P-201ENST00000495150 836 ntBASIC16.83■□□□□ 0.28
TNFSF9P41273 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
TNFSF9P41273 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TNFSF9P41273 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TNFSF9P41273 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFSF9P41273 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNFSF9P41273 AC239800.4-201ENST00000603712 296 ntBASIC16.83■□□□□ 0.28
TNFSF9P41273 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.83■□□□□ 0.28
TNFSF9P41273 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNFSF9P41273 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFSF9P41273 CICP11-201ENST00000434745 2827 ntBASIC16.83■□□□□ 0.28
TNFSF9P41273 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFSF9P41273 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 AL162726.2-201ENST00000438986 1017 ntBASIC16.82■□□□□ 0.28
TNFSF9P41273 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFSF9P41273 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.82■□□□□ 0.28
TNFSF9P41273 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.82■□□□□ 0.28
TNFSF9P41273 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFSF9P41273 CLUHP6-201ENST00000580789 941 ntBASIC16.82■□□□□ 0.28
TNFSF9P41273 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 AC005252.2-201ENST00000624630 1141 ntBASIC16.82■□□□□ 0.28
TNFSF9P41273 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFSF9P41273 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFSF9P41273 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFSF9P41273 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
TNFSF9P41273 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFSF9P41273 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TNFSF9P41273 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms