Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.14□□□□□ -0.15
APOBEC1P41238 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 PPT1-215ENST00000641471 2368 ntBASIC14.14□□□□□ -0.15
APOBEC1P41238 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APOBEC1P41238 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.14□□□□□ -0.15
APOBEC1P41238 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.14□□□□□ -0.15
APOBEC1P41238 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.14□□□□□ -0.15
APOBEC1P41238 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.14□□□□□ -0.15
APOBEC1P41238 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
APOBEC1P41238 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APOBEC1P41238 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 AL121723.1-201ENST00000445194 1519 ntBASIC14.14□□□□□ -0.15
APOBEC1P41238 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.14□□□□□ -0.15
APOBEC1P41238 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOBEC1P41238 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 AC126177.1-201ENST00000547829 2218 ntBASIC14.13□□□□□ -0.15
APOBEC1P41238 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
APOBEC1P41238 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.13□□□□□ -0.15
APOBEC1P41238 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
APOBEC1P41238 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 MEP1AP4-201ENST00000423244 1087 ntBASIC14.13□□□□□ -0.15
APOBEC1P41238 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.13□□□□□ -0.15
APOBEC1P41238 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
APOBEC1P41238 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 AC009118.2-201ENST00000613275 655 ntBASIC14.13□□□□□ -0.15
APOBEC1P41238 AJ011932.1-201ENST00000621707 465 ntBASIC14.13□□□□□ -0.15
APOBEC1P41238 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
APOBEC1P41238 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.13□□□□□ -0.15
APOBEC1P41238 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.13□□□□□ -0.15
APOBEC1P41238 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.13□□□□□ -0.15
APOBEC1P41238 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBEC1P41238 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
APOBEC1P41238 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.12□□□□□ -0.15
APOBEC1P41238 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
APOBEC1P41238 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
APOBEC1P41238 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
APOBEC1P41238 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBEC1P41238 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
APOBEC1P41238 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.12□□□□□ -0.15
APOBEC1P41238 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
APOBEC1P41238 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms