Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC007541.1-201ENST00000570282 1469 ntBASIC16.53■□□□□ 0.24
CHKAP35790 AC009090.5-201ENST00000624886 2285 ntBASIC16.53■□□□□ 0.24
CHKAP35790 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CHKAP35790 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 AC091951.1-201ENST00000512854 2465 ntBASIC16.53■□□□□ 0.24
CHKAP35790 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 AC011477.6-201ENST00000604980 1927 ntBASIC16.53■□□□□ 0.24
CHKAP35790 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHKAP35790 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.52■□□□□ 0.24
CHKAP35790 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CHKAP35790 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CHKAP35790 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.52■□□□□ 0.24
CHKAP35790 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.52■□□□□ 0.24
CHKAP35790 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CHKAP35790 AC087499.6-201ENST00000411576 835 ntBASIC16.52■□□□□ 0.24
CHKAP35790 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.52■□□□□ 0.24
CHKAP35790 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.52■□□□□ 0.24
CHKAP35790 HIST3H2BA-201ENST00000436555 524 ntBASIC16.52■□□□□ 0.24
CHKAP35790 EEF1DP4-201ENST00000446006 880 ntBASIC16.52■□□□□ 0.24
CHKAP35790 AC093004.1-201ENST00000508850 424 ntBASIC16.52■□□□□ 0.24
CHKAP35790 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.52■□□□□ 0.24
CHKAP35790 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
CHKAP35790 AC104794.3-201ENST00000566840 1248 ntBASIC16.52■□□□□ 0.24
CHKAP35790 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.52■□□□□ 0.24
CHKAP35790 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.52■□□□□ 0.24
CHKAP35790 AC074044.1-201ENST00000609673 707 ntBASIC16.52■□□□□ 0.24
CHKAP35790 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHKAP35790 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.52■□□□□ 0.23
CHKAP35790 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHKAP35790 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CHKAP35790 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHKAP35790 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.52■□□□□ 0.23
CHKAP35790 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHKAP35790 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHKAP35790 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.52■□□□□ 0.23
CHKAP35790 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHKAP35790 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.51■□□□□ 0.23
CHKAP35790 MEP1AP4-201ENST00000423244 1087 ntBASIC16.51■□□□□ 0.23
CHKAP35790 DFFBP1-201ENST00000433250 979 ntBASIC16.51■□□□□ 0.23
CHKAP35790 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.51■□□□□ 0.23
CHKAP35790 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.51■□□□□ 0.23
CHKAP35790 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CHKAP35790 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKAP35790 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.51■□□□□ 0.23
CHKAP35790 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CHKAP35790 AC025048.3-201ENST00000590609 569 ntBASIC16.51■□□□□ 0.23
CHKAP35790 AL132655.2-201ENST00000596276 594 ntBASIC16.51■□□□□ 0.23
CHKAP35790 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHKAP35790 AC005702.4-201ENST00000618393 416 ntBASIC16.51■□□□□ 0.23
CHKAP35790 AC004461.2-201ENST00000629517 803 ntBASIC16.51■□□□□ 0.23
CHKAP35790 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms