Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHA3P29320 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
EPHA3P29320 MIR600HG-201ENST00000449175 5984 ntBASIC15.27■□□□□ 0.04
EPHA3P29320 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHA3P29320 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.27■□□□□ 0.04
EPHA3P29320 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHA3P29320 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHA3P29320 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHA3P29320 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHA3P29320 PDPK2P-202ENST00000562415 1191 ntBASIC15.27■□□□□ 0.04
EPHA3P29320 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.27■□□□□ 0.04
EPHA3P29320 AC097359.3-201ENST00000603982 1210 ntBASIC15.27■□□□□ 0.04
EPHA3P29320 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHA3P29320 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.27■□□□□ 0.03
EPHA3P29320 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA3P29320 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.27■□□□□ 0.03
EPHA3P29320 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA3P29320 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA3P29320 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA3P29320 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
EPHA3P29320 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 AC142381.1-201ENST00000426099 345 ntBASIC15.26■□□□□ 0.03
EPHA3P29320 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA3P29320 AC112191.1-201ENST00000523689 701 ntBASIC15.26■□□□□ 0.03
EPHA3P29320 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA3P29320 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.26■□□□□ 0.03
EPHA3P29320 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA3P29320 HNRNPUP1-201ENST00000554987 333 ntBASIC15.26■□□□□ 0.03
EPHA3P29320 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.26■□□□□ 0.03
EPHA3P29320 AC027307.2-201ENST00000591252 911 ntBASIC15.26■□□□□ 0.03
EPHA3P29320 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA3P29320 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
EPHA3P29320 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.26■□□□□ 0.03
EPHA3P29320 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
EPHA3P29320 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
EPHA3P29320 CICP11-201ENST00000434745 2827 ntBASIC15.26■□□□□ 0.03
EPHA3P29320 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
EPHA3P29320 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.26■□□□□ 0.03
EPHA3P29320 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.26■□□□□ 0.03
EPHA3P29320 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA3P29320 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
EPHA3P29320 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.26■□□□□ 0.03
EPHA3P29320 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA3P29320 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
EPHA3P29320 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
EPHA3P29320 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 INTS4P1-203ENST00000641008 3683 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
EPHA3P29320 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.25■□□□□ 0.03
EPHA3P29320 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 AC007967.2-201ENST00000432613 625 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 EEF1DP4-201ENST00000446006 880 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 FAAHP1-202ENST00000446499 1238 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 AL139010.1-201ENST00000454878 894 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA3P29320 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.25■□□□□ 0.03
EPHA3P29320 AC034105.1-201ENST00000563488 319 ntBASIC15.25■□□□□ 0.03
EPHA3P29320 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.25■□□□□ 0.03
EPHA3P29320 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA3P29320 AL513190.1-201ENST00000621254 727 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms