Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.62□□□□□ -0.39
CNTFRP26992 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 TMBIM7P-203ENST00000641617 1718 ntBASIC12.62□□□□□ -0.39
CNTFRP26992 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CNTFRP26992 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.62□□□□□ -0.39
CNTFRP26992 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.62□□□□□ -0.39
CNTFRP26992 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CNTFRP26992 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CNTFRP26992 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNTFRP26992 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CNTFRP26992 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CNTFRP26992 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.61□□□□□ -0.39
CNTFRP26992 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.61□□□□□ -0.39
CNTFRP26992 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.61□□□□□ -0.39
CNTFRP26992 AC055876.3-201ENST00000431496 288 ntBASIC12.61□□□□□ -0.39
CNTFRP26992 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.61□□□□□ -0.39
CNTFRP26992 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 RFPL4AP1-201ENST00000530883 850 ntBASIC12.61□□□□□ -0.39
CNTFRP26992 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.61□□□□□ -0.39
CNTFRP26992 AC138649.4-201ENST00000612222 287 ntBASIC12.61□□□□□ -0.39
CNTFRP26992 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 AC087499.5-201ENST00000452760 1342 ntBASIC12.61□□□□□ -0.39
CNTFRP26992 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CNTFRP26992 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNTFRP26992 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CNTFRP26992 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
CNTFRP26992 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CNTFRP26992 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.6□□□□□ -0.39
CNTFRP26992 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.6□□□□□ -0.39
CNTFRP26992 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CNTFRP26992 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.6□□□□□ -0.39
CNTFRP26992 AC138035.3-201ENST00000622706 2791 ntBASIC12.6□□□□□ -0.39
CNTFRP26992 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.6□□□□□ -0.39
CNTFRP26992 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.6□□□□□ -0.39
CNTFRP26992 AC022532.1-201ENST00000624563 1728 ntBASIC12.6□□□□□ -0.39
CNTFRP26992 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.6□□□□□ -0.39
CNTFRP26992 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CNTFRP26992 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNTFRP26992 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms