Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.21□□□□□ -0.29
COL8A2P25067 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.21□□□□□ -0.29
COL8A2P25067 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
COL8A2P25067 AC112504.1-201ENST00000623415 1841 ntBASIC13.21□□□□□ -0.29
COL8A2P25067 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
COL8A2P25067 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
COL8A2P25067 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
COL8A2P25067 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.21□□□□□ -0.29
COL8A2P25067 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.21□□□□□ -0.29
COL8A2P25067 AC134915.1-201ENST00000426461 574 ntBASIC13.21□□□□□ -0.29
COL8A2P25067 AL442647.2-201ENST00000429864 857 ntBASIC13.21□□□□□ -0.29
COL8A2P25067 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.21□□□□□ -0.29
COL8A2P25067 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.21□□□□□ -0.29
COL8A2P25067 AC007389.4-201ENST00000454674 793 ntBASIC13.21□□□□□ -0.29
COL8A2P25067 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.21□□□□□ -0.29
COL8A2P25067 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.21□□□□□ -0.29
COL8A2P25067 HILS1-202ENST00000545329 423 ntBASIC13.21□□□□□ -0.29
COL8A2P25067 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.21□□□□□ -0.29
COL8A2P25067 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.21□□□□□ -0.29
COL8A2P25067 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.21□□□□□ -0.29
COL8A2P25067 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.21□□□□□ -0.29
COL8A2P25067 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
COL8A2P25067 AL121723.1-201ENST00000445194 1519 ntBASIC13.21□□□□□ -0.29
COL8A2P25067 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.21□□□□□ -0.29
COL8A2P25067 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
COL8A2P25067 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.21□□□□□ -0.29
COL8A2P25067 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL8A2P25067 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
COL8A2P25067 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
COL8A2P25067 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.21□□□□□ -0.3
COL8A2P25067 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL8A2P25067 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL8A2P25067 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
COL8A2P25067 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.21□□□□□ -0.3
COL8A2P25067 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.21□□□□□ -0.3
COL8A2P25067 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL8A2P25067 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL8A2P25067 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL8A2P25067 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
COL8A2P25067 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
COL8A2P25067 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.2□□□□□ -0.3
COL8A2P25067 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.2□□□□□ -0.3
COL8A2P25067 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
COL8A2P25067 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
COL8A2P25067 ARSEP1-201ENST00000420443 635 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 AC112492.5-201ENST00000421897 457 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 TMEM14DP-201ENST00000422205 345 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.2□□□□□ -0.3
COL8A2P25067 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.2□□□□□ -0.3
COL8A2P25067 KRT17P8-201ENST00000540749 863 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 AL603832.2-201ENST00000566195 2125 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 AC010319.3-201ENST00000597028 470 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 AL162274.1-201ENST00000617191 1098 ntBASIC13.2□□□□□ -0.3
COL8A2P25067 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.2□□□□□ -0.3
COL8A2P25067 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.2□□□□□ -0.3
COL8A2P25067 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
COL8A2P25067 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.2□□□□□ -0.3
COL8A2P25067 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COL8A2P25067 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms