Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 C18orf15-201ENST00000623680 2534 ntBASIC14.68□□□□□ -0.06
CHMP24386 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHMP24386 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.68□□□□□ -0.06
CHMP24386 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.68□□□□□ -0.06
CHMP24386 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHMP24386 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.68□□□□□ -0.06
CHMP24386 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP24386 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.68□□□□□ -0.06
CHMP24386 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.68□□□□□ -0.06
CHMP24386 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP24386 AC026979.3-201ENST00000607315 403 ntBASIC14.68□□□□□ -0.06
CHMP24386 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP24386 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP24386 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP24386 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP24386 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP24386 LINC01101-201ENST00000622953 1884 ntBASIC14.67□□□□□ -0.06
CHMP24386 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 AC023908.3-201ENST00000564211 3047 ntBASIC14.67□□□□□ -0.06
CHMP24386 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.67□□□□□ -0.06
CHMP24386 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.67□□□□□ -0.06
CHMP24386 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHMP24386 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHMP24386 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 MIR943-201ENST00000401286 94 ntBASIC14.67□□□□□ -0.06
CHMP24386 BASP1P1-201ENST00000430708 665 ntBASIC14.67□□□□□ -0.06
CHMP24386 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP24386 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.67□□□□□ -0.06
CHMP24386 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 DUX4L27-201ENST00000554796 1261 ntBASIC14.67□□□□□ -0.06
CHMP24386 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 MIR4321-201ENST00000592276 80 ntBASIC14.67□□□□□ -0.06
CHMP24386 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.67□□□□□ -0.06
CHMP24386 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CHMP24386 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHMP24386 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 AP001282.1-201ENST00000531301 1499 ntBASIC14.67□□□□□ -0.06
CHMP24386 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHMP24386 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.67□□□□□ -0.06
CHMP24386 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.67□□□□□ -0.06
CHMP24386 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms