Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFX1P22670 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RFX1P22670 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 AC112693.3-201ENST00000624819 1983 ntBASIC17.03■□□□□ 0.32
RFX1P22670 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RFX1P22670 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX1P22670 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX1P22670 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RFX1P22670 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX1P22670 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 AC135586.1-201ENST00000539323 574 ntBASIC17.03■□□□□ 0.32
RFX1P22670 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX1P22670 RN7SL828P-201ENST00000607615 303 ntBASIC17.03■□□□□ 0.32
RFX1P22670 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.03■□□□□ 0.32
RFX1P22670 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.03■□□□□ 0.32
RFX1P22670 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.03■□□□□ 0.32
RFX1P22670 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
RFX1P22670 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.03■□□□□ 0.32
RFX1P22670 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
RFX1P22670 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RFX1P22670 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RFX1P22670 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX1P22670 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX1P22670 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RFX1P22670 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RFX1P22670 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX1P22670 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RFX1P22670 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX1P22670 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
RFX1P22670 HIST3H2BA-201ENST00000436555 524 ntBASIC17.02■□□□□ 0.32
RFX1P22670 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX1P22670 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.02■□□□□ 0.32
RFX1P22670 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 AC008738.7-201ENST00000609744 511 ntBASIC17.02■□□□□ 0.32
RFX1P22670 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX1P22670 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFX1P22670 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
RFX1P22670 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFX1P22670 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RFX1P22670 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX1P22670 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RFX1P22670 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RFX1P22670 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX1P22670 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX1P22670 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX1P22670 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX1P22670 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RFX1P22670 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX1P22670 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFX1P22670 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 AC126365.1-201ENST00000578585 1514 ntBASIC17.01■□□□□ 0.31
RFX1P22670 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 AC087499.5-201ENST00000452760 1342 ntBASIC17.01■□□□□ 0.31
RFX1P22670 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX1P22670 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RFX1P22670 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms