Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BMP3P12645 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BMP3P12645 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.92■□□□□ 0.46
BMP3P12645 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.92■□□□□ 0.46
BMP3P12645 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
BMP3P12645 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.92■□□□□ 0.46
BMP3P12645 CSF2RBP1-201ENST00000447905 391 ntBASIC17.92■□□□□ 0.46
BMP3P12645 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.92■□□□□ 0.46
BMP3P12645 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.92■□□□□ 0.46
BMP3P12645 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.92■□□□□ 0.46
BMP3P12645 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.92■□□□□ 0.46
BMP3P12645 AC025279.2-201ENST00000569730 653 ntBASIC17.92■□□□□ 0.46
BMP3P12645 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BMP3P12645 KRT8P35-201ENST00000483942 1338 ntBASIC17.92■□□□□ 0.46
BMP3P12645 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BMP3P12645 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 DOC2GP-204ENST00000639052 2548 ntBASIC17.92■□□□□ 0.46
BMP3P12645 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 RNU1-114P-201ENST00000365297 166 ntBASIC17.91■□□□□ 0.46
BMP3P12645 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.91■□□□□ 0.46
BMP3P12645 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.91■□□□□ 0.46
BMP3P12645 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.91■□□□□ 0.46
BMP3P12645 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.91■□□□□ 0.46
BMP3P12645 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.91■□□□□ 0.46
BMP3P12645 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.91■□□□□ 0.46
BMP3P12645 AC145423.3-201ENST00000615987 467 ntBASIC17.91■□□□□ 0.46
BMP3P12645 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
BMP3P12645 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.91■□□□□ 0.46
BMP3P12645 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BMP3P12645 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BMP3P12645 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
BMP3P12645 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 AL139384.1-201ENST00000612143 3047 ntBASIC17.9■□□□□ 0.46
BMP3P12645 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.9■□□□□ 0.46
BMP3P12645 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 AC009090.5-201ENST00000624886 2285 ntBASIC17.9■□□□□ 0.46
BMP3P12645 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 KLF2P2-201ENST00000416807 1039 ntBASIC17.9■□□□□ 0.46
BMP3P12645 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 NUS1P3-201ENST00000423502 862 ntBASIC17.9■□□□□ 0.46
BMP3P12645 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
BMP3P12645 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BMP3P12645 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.9■□□□□ 0.46
BMP3P12645 AC114812.1-204ENST00000449669 728 ntBASIC17.9■□□□□ 0.46
BMP3P12645 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.9■□□□□ 0.46
BMP3P12645 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.9■□□□□ 0.46
BMP3P12645 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.9■□□□□ 0.46
BMP3P12645 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.9■□□□□ 0.46
BMP3P12645 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.9■□□□□ 0.46
BMP3P12645 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.9■□□□□ 0.46
BMP3P12645 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.9■□□□□ 0.46
BMP3P12645 MIR6799-201ENST00000620297 69 ntBASIC17.9■□□□□ 0.46
BMP3P12645 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms