Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HOXC6P09630 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXC6P09630 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HOXC6P09630 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC6P09630 AL139094.1-201ENST00000405549 1188 ntBASIC17.49■□□□□ 0.39
HOXC6P09630 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXC6P09630 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HOXC6P09630 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HOXC6P09630 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.49■□□□□ 0.39
HOXC6P09630 AC244157.2-201ENST00000616239 1006 ntBASIC17.49■□□□□ 0.39
HOXC6P09630 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HOXC6P09630 OR6D1P-203ENST00000641209 4860 ntBASIC17.49■□□□□ 0.39
HOXC6P09630 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC6P09630 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HOXC6P09630 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 PKD1P1-201ENST00000458669 6805 ntBASIC17.48■□□□□ 0.39
HOXC6P09630 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC6P09630 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 CYP2T1P-202ENST00000641596 2535 ntBASIC17.48■□□□□ 0.39
HOXC6P09630 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HOXC6P09630 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.48■□□□□ 0.39
HOXC6P09630 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.48■□□□□ 0.39
HOXC6P09630 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 CHMP4BP1-201ENST00000556017 588 ntBASIC17.48■□□□□ 0.39
HOXC6P09630 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.48■□□□□ 0.39
HOXC6P09630 NDUFV2P1-201ENST00000596415 907 ntBASIC17.48■□□□□ 0.39
HOXC6P09630 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.48■□□□□ 0.39
HOXC6P09630 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 AL451050.2-201ENST00000606967 682 ntBASIC17.48■□□□□ 0.39
HOXC6P09630 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HOXC6P09630 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HOXC6P09630 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC6P09630 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HOXC6P09630 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC6P09630 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
HOXC6P09630 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC6P09630 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 UPF3AP2-201ENST00000457924 1132 ntBASIC17.47■□□□□ 0.39
HOXC6P09630 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
HOXC6P09630 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXC6P09630 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HOXC6P09630 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC6P09630 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.47■□□□□ 0.39
HOXC6P09630 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HOXC6P09630 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC6P09630 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC6P09630 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms