Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.04□□□□□ -0.32
CTSDP07339 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.04□□□□□ -0.32
CTSDP07339 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.04□□□□□ -0.32
CTSDP07339 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.04□□□□□ -0.32
CTSDP07339 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.04□□□□□ -0.32
CTSDP07339 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 AC073389.1-201ENST00000595595 795 ntBASIC13.04□□□□□ -0.32
CTSDP07339 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 AL161645.1-201ENST00000622716 1255 ntBASIC13.04□□□□□ -0.32
CTSDP07339 AC007064.4-201ENST00000637740 555 ntBASIC13.04□□□□□ -0.32
CTSDP07339 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CTSDP07339 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.04□□□□□ -0.32
CTSDP07339 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CTSDP07339 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.03□□□□□ -0.32
CTSDP07339 CRYGEP-201ENST00000412192 528 ntBASIC13.03□□□□□ -0.32
CTSDP07339 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.03□□□□□ -0.32
CTSDP07339 FAM197Y8-203ENST00000450145 560 ntBASIC13.03□□□□□ -0.32
CTSDP07339 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.03□□□□□ -0.32
CTSDP07339 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.03□□□□□ -0.32
CTSDP07339 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 AC023141.13-201ENST00000604991 943 ntBASIC13.03□□□□□ -0.32
CTSDP07339 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.03□□□□□ -0.32
CTSDP07339 SPTSSB-204ENST00000617024 1292 ntBASIC13.03□□□□□ -0.32
CTSDP07339 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.03□□□□□ -0.32
CTSDP07339 AL031008.1-201ENST00000619963 541 ntBASIC13.03□□□□□ -0.32
CTSDP07339 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 ACE3P-201ENST00000423435 1973 ntBASIC13.03□□□□□ -0.32
CTSDP07339 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.03□□□□□ -0.32
CTSDP07339 KRT8P37-201ENST00000451609 1420 ntBASIC13.03□□□□□ -0.32
CTSDP07339 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.03□□□□□ -0.32
CTSDP07339 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.03□□□□□ -0.32
CTSDP07339 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTSDP07339 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.03□□□□□ -0.32
CTSDP07339 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.02□□□□□ -0.32
CTSDP07339 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CTSDP07339 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CTSDP07339 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTSDP07339 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTSDP07339 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
CTSDP07339 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTSDP07339 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CTSDP07339 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTSDP07339 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CTSDP07339 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.02□□□□□ -0.32
CTSDP07339 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms