Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HMGN1P05114 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HMGN1P05114 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGN1P05114 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGN1P05114 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGN1P05114 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 WASH3P-207ENST00000560956 1394 ntBASIC14.22□□□□□ -0.13
HMGN1P05114 FO538757.1-201ENST00000623083 1397 ntBASIC14.22□□□□□ -0.13
HMGN1P05114 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGN1P05114 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGN1P05114 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGN1P05114 HLA-H-201ENST00000383620 1096 ntBASIC14.22□□□□□ -0.13
HMGN1P05114 MRPL3P1-201ENST00000400109 1033 ntBASIC14.22□□□□□ -0.13
HMGN1P05114 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HMGN1P05114 AC142381.1-201ENST00000426099 345 ntBASIC14.22□□□□□ -0.13
HMGN1P05114 AL671277.1-201ENST00000429656 993 ntBASIC14.22□□□□□ -0.13
HMGN1P05114 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGN1P05114 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGN1P05114 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HMGN1P05114 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGN1P05114 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HMGN1P05114 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGN1P05114 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGN1P05114 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMGN1P05114 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HMGN1P05114 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMGN1P05114 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMGN1P05114 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HMGN1P05114 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGN1P05114 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMGN1P05114 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 AC005089.1-201ENST00000619486 2241 ntBASIC14.21□□□□□ -0.13
HMGN1P05114 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGN1P05114 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGN1P05114 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGN1P05114 TFAMP1-201ENST00000412727 736 ntBASIC14.21□□□□□ -0.13
HMGN1P05114 FAM8A3P-201ENST00000427218 844 ntBASIC14.21□□□□□ -0.13
HMGN1P05114 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGN1P05114 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGN1P05114 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGN1P05114 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.21□□□□□ -0.13
HMGN1P05114 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.21□□□□□ -0.13
HMGN1P05114 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.21□□□□□ -0.13
HMGN1P05114 AC034105.1-201ENST00000563488 319 ntBASIC14.21□□□□□ -0.13
HMGN1P05114 AC097359.3-201ENST00000603982 1210 ntBASIC14.21□□□□□ -0.13
HMGN1P05114 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGN1P05114 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGN1P05114 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HMGN1P05114 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms