Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.69■□□□□ 0.58
CHGBP05060 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.69■□□□□ 0.58
CHGBP05060 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 GAPDHP21-201ENST00000450301 1010 ntBASIC18.69■□□□□ 0.58
CHGBP05060 AC104596.2-201ENST00000512793 793 ntBASIC18.69■□□□□ 0.58
CHGBP05060 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CHGBP05060 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
CHGBP05060 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.69■□□□□ 0.58
CHGBP05060 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.68■□□□□ 0.58
CHGBP05060 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
CHGBP05060 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.68■□□□□ 0.58
CHGBP05060 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CHGBP05060 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHGBP05060 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CHGBP05060 AL442647.2-201ENST00000429864 857 ntBASIC18.68■□□□□ 0.58
CHGBP05060 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.68■□□□□ 0.58
CHGBP05060 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHGBP05060 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHGBP05060 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CHGBP05060 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
CHGBP05060 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.68■□□□□ 0.58
CHGBP05060 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHGBP05060 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.67■□□□□ 0.58
CHGBP05060 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.67■□□□□ 0.58
CHGBP05060 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.67■□□□□ 0.58
CHGBP05060 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHGBP05060 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.67■□□□□ 0.58
CHGBP05060 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.67■□□□□ 0.58
CHGBP05060 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.67■□□□□ 0.58
CHGBP05060 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.67■□□□□ 0.58
CHGBP05060 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.67■□□□□ 0.58
CHGBP05060 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.67■□□□□ 0.58
CHGBP05060 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHGBP05060 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.67■□□□□ 0.58
CHGBP05060 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
CHGBP05060 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHGBP05060 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.66■□□□□ 0.58
CHGBP05060 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CHGBP05060 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 PKD1P1-201ENST00000458669 6805 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms