Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 GHSR-202ENST00000427970 912 ntBASIC13.18□□□□□ -0.3
CD74P04233 AC140658.5-201ENST00000438532 169 ntBASIC13.18□□□□□ -0.3
CD74P04233 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 AC073648.2-201ENST00000510116 352 ntBASIC13.18□□□□□ -0.3
CD74P04233 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.18□□□□□ -0.3
CD74P04233 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CD74P04233 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.18□□□□□ -0.3
CD74P04233 HNRNPUP1-201ENST00000554987 333 ntBASIC13.18□□□□□ -0.3
CD74P04233 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.18□□□□□ -0.3
CD74P04233 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 AC073389.1-201ENST00000595595 795 ntBASIC13.18□□□□□ -0.3
CD74P04233 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.18□□□□□ -0.3
CD74P04233 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.18□□□□□ -0.3
CD74P04233 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.18□□□□□ -0.3
CD74P04233 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CD74P04233 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 AC097359.2-201ENST00000604992 2389 ntBASIC13.17□□□□□ -0.3
CD74P04233 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.17□□□□□ -0.3
CD74P04233 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 AL136982.4-201ENST00000437689 1740 ntBASIC13.17□□□□□ -0.3
CD74P04233 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 AC084364.1-201ENST00000551967 1556 ntBASIC13.17□□□□□ -0.3
CD74P04233 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 AC091304.2-201ENST00000564639 760 ntBASIC13.17□□□□□ -0.3
CD74P04233 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.17□□□□□ -0.3
CD74P04233 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.17□□□□□ -0.3
CD74P04233 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 CICP11-201ENST00000434745 2827 ntBASIC13.17□□□□□ -0.3
CD74P04233 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD74P04233 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
CD74P04233 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.17□□□□□ -0.3
CD74P04233 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD74P04233 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CD74P04233 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms