Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.53■□□□□ 0.56
COL1A1P02452 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.53■□□□□ 0.56
COL1A1P02452 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.53■□□□□ 0.56
COL1A1P02452 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.53■□□□□ 0.56
COL1A1P02452 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 AC138028.6-201ENST00000616106 1482 ntBASIC18.53■□□□□ 0.56
COL1A1P02452 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL1A1P02452 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.53■□□□□ 0.56
COL1A1P02452 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.53■□□□□ 0.56
COL1A1P02452 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL1A1P02452 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL1A1P02452 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.52■□□□□ 0.56
COL1A1P02452 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.52■□□□□ 0.56
COL1A1P02452 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
COL1A1P02452 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.52■□□□□ 0.56
COL1A1P02452 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.52■□□□□ 0.56
COL1A1P02452 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.52■□□□□ 0.56
COL1A1P02452 ENPP7P14-201ENST00000621765 1040 ntBASIC18.52■□□□□ 0.56
COL1A1P02452 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.52■□□□□ 0.56
COL1A1P02452 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.52■□□□□ 0.56
COL1A1P02452 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
COL1A1P02452 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL1A1P02452 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
COL1A1P02452 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL1A1P02452 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
COL1A1P02452 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
COL1A1P02452 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 ELK2AP-201ENST00000392510 1007 ntBASIC18.52■□□□□ 0.55
COL1A1P02452 AL645937.2-201ENST00000396808 931 ntBASIC18.52■□□□□ 0.55
COL1A1P02452 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
COL1A1P02452 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
COL1A1P02452 GHSR-202ENST00000427970 912 ntBASIC18.52■□□□□ 0.55
COL1A1P02452 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.52■□□□□ 0.55
COL1A1P02452 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COL1A1P02452 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.52■□□□□ 0.55
COL1A1P02452 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL1A1P02452 LRRC59-203ENST00000576448 1531 ntBASIC18.52■□□□□ 0.55
COL1A1P02452 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.52■□□□□ 0.55
COL1A1P02452 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.52■□□□□ 0.55
COL1A1P02452 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COL1A1P02452 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
COL1A1P02452 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL1A1P02452 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 RPL5P21-201ENST00000404620 815 ntBASIC18.51■□□□□ 0.55
COL1A1P02452 CD8B2-202ENST00000417670 633 ntBASIC18.51■□□□□ 0.55
COL1A1P02452 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.51■□□□□ 0.55
COL1A1P02452 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms