Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.44□□□□□ -0.42
IFNA1P01562 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.44□□□□□ -0.42
IFNA1P01562 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.44□□□□□ -0.42
IFNA1P01562 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.44□□□□□ -0.42
IFNA1P01562 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.44□□□□□ -0.42
IFNA1P01562 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
IFNA1P01562 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.44□□□□□ -0.42
IFNA1P01562 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
IFNA1P01562 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 AC092135.3-201ENST00000624151 1846 ntBASIC12.44□□□□□ -0.42
IFNA1P01562 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IFNA1P01562 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
IFNA1P01562 PCDHA5-203ENST00000614258 4248 ntBASIC12.43□□□□□ -0.42
IFNA1P01562 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.43□□□□□ -0.42
IFNA1P01562 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.43□□□□□ -0.42
IFNA1P01562 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.43□□□□□ -0.42
IFNA1P01562 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.43□□□□□ -0.42
IFNA1P01562 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.43□□□□□ -0.42
IFNA1P01562 TMEM191A-211ENST00000637163 1067 ntBASIC12.43□□□□□ -0.42
IFNA1P01562 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.43□□□□□ -0.42
IFNA1P01562 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.43□□□□□ -0.42
IFNA1P01562 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.43□□□□□ -0.42
IFNA1P01562 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IFNA1P01562 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
IFNA1P01562 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms