Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 DNM1P30-201ENST00000563586 452 ntBASIC17.56■□□□□ 0.4
ALDH1A1P00352 SNORD3B-2-202ENST00000571722 791 ntBASIC17.56■□□□□ 0.4
ALDH1A1P00352 MIR4313-201ENST00000580760 101 ntBASIC17.56■□□□□ 0.4
ALDH1A1P00352 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 MIR6756-201ENST00000616240 63 ntBASIC17.56■□□□□ 0.4
ALDH1A1P00352 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ALDH1A1P00352 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALDH1A1P00352 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 AL627231.1-201ENST00000394467 1125 ntBASIC17.55■□□□□ 0.4
ALDH1A1P00352 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 AC234644.1-201ENST00000406065 370 ntBASIC17.55■□□□□ 0.4
ALDH1A1P00352 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 MESTP3-201ENST00000503460 968 ntBASIC17.55■□□□□ 0.4
ALDH1A1P00352 CTBP2P4-201ENST00000513884 920 ntBASIC17.55■□□□□ 0.4
ALDH1A1P00352 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 ME2P1-201ENST00000426028 1970 ntBASIC17.55■□□□□ 0.4
ALDH1A1P00352 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ALDH1A1P00352 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALDH1A1P00352 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AL160314.3-201ENST00000556041 767 ntBASIC17.54■□□□□ 0.4
ALDH1A1P00352 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.54■□□□□ 0.4
ALDH1A1P00352 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AL136301.1-201ENST00000615830 422 ntBASIC17.54■□□□□ 0.4
ALDH1A1P00352 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALDH1A1P00352 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms