Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CNOT4O95628 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.97□□□□□ -0.17
CNOT4O95628 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT4O95628 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.97□□□□□ -0.17
CNOT4O95628 RPL13P2-201ENST00000440687 659 ntBASIC13.97□□□□□ -0.17
CNOT4O95628 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.97□□□□□ -0.17
CNOT4O95628 AC104794.3-201ENST00000566840 1248 ntBASIC13.97□□□□□ -0.17
CNOT4O95628 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.97□□□□□ -0.17
CNOT4O95628 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.97□□□□□ -0.17
CNOT4O95628 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNOT4O95628 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CNOT4O95628 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
CNOT4O95628 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT4O95628 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
CNOT4O95628 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 TOMM22P5-201ENST00000416399 439 ntBASIC13.96□□□□□ -0.17
CNOT4O95628 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CNOT4O95628 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.96□□□□□ -0.17
CNOT4O95628 TARDBPP1-201ENST00000442013 1203 ntBASIC13.96□□□□□ -0.17
CNOT4O95628 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT4O95628 GPR53P-205ENST00000457298 1084 ntBASIC13.96□□□□□ -0.17
CNOT4O95628 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.96□□□□□ -0.17
CNOT4O95628 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.96□□□□□ -0.17
CNOT4O95628 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 HNRNPUP1-201ENST00000554987 333 ntBASIC13.96□□□□□ -0.17
CNOT4O95628 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.96□□□□□ -0.17
CNOT4O95628 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT4O95628 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT4O95628 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
CNOT4O95628 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT4O95628 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.96□□□□□ -0.17
CNOT4O95628 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.96□□□□□ -0.18
CNOT4O95628 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CNOT4O95628 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CNOT4O95628 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT4O95628 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT4O95628 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
CNOT4O95628 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT4O95628 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT4O95628 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT4O95628 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 SBF1P1-201ENST00000444527 5631 ntBASIC13.95□□□□□ -0.18
CNOT4O95628 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CNOT4O95628 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CNOT4O95628 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT4O95628 AC007950.2-201ENST00000615045 2347 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms