Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTDNEP1O95476 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTDNEP1O95476 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTDNEP1O95476 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTDNEP1O95476 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTDNEP1O95476 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTDNEP1O95476 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.04■□□□□ 0.48
CTDNEP1O95476 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.04■□□□□ 0.48
CTDNEP1O95476 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 PMS2P2-201ENST00000425039 1128 ntBASIC18.03■□□□□ 0.48
CTDNEP1O95476 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 AC135586.1-201ENST00000539323 574 ntBASIC18.03■□□□□ 0.48
CTDNEP1O95476 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 REXO1L4P-201ENST00000605109 1937 ntBASIC18.03■□□□□ 0.48
CTDNEP1O95476 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTDNEP1O95476 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.03■□□□□ 0.48
CTDNEP1O95476 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 MEIS3P1-201ENST00000495167 958 ntBASIC18.02■□□□□ 0.48
CTDNEP1O95476 GAPDHP40-201ENST00000505218 1006 ntBASIC18.02■□□□□ 0.48
CTDNEP1O95476 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 AC104794.3-201ENST00000566840 1248 ntBASIC18.02■□□□□ 0.48
CTDNEP1O95476 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CTDNEP1O95476 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTDNEP1O95476 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CTDNEP1O95476 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CTDNEP1O95476 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CTDNEP1O95476 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTDNEP1O95476 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTDNEP1O95476 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTDNEP1O95476 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTDNEP1O95476 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTDNEP1O95476 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTDNEP1O95476 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTDNEP1O95476 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTDNEP1O95476 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTDNEP1O95476 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.01■□□□□ 0.47
CTDNEP1O95476 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTDNEP1O95476 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.01■□□□□ 0.47
CTDNEP1O95476 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.01■□□□□ 0.47
CTDNEP1O95476 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTDNEP1O95476 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.01■□□□□ 0.47
CTDNEP1O95476 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.01■□□□□ 0.47
CTDNEP1O95476 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.01■□□□□ 0.47
CTDNEP1O95476 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTDNEP1O95476 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.01■□□□□ 0.47
CTDNEP1O95476 UGT1A2P-201ENST00000454886 866 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms