Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE3O75131 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE3O75131 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE3O75131 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CPNE3O75131 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE3O75131 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE3O75131 GPR53P-205ENST00000457298 1084 ntBASIC15.09■□□□□ 0.01
CPNE3O75131 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 ELK1P1-201ENST00000485699 580 ntBASIC15.09■□□□□ 0.01
CPNE3O75131 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.09■□□□□ 0.01
CPNE3O75131 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE3O75131 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CPNE3O75131 IGHV3-72-202ENST00000621503 303 ntBASIC15.09■□□□□ 0.01
CPNE3O75131 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 BNIP3P1-202ENST00000550043 1585 ntBASIC15.09■□□□□ 0.01
CPNE3O75131 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE3O75131 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE3O75131 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CPNE3O75131 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CPNE3O75131 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CPNE3O75131 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE3O75131 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
CPNE3O75131 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE3O75131 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE3O75131 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CPNE3O75131 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.08■□□□□ 0
CPNE3O75131 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.08■□□□□ 0
CPNE3O75131 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.08■□□□□ 0
CPNE3O75131 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 AC036164.1-201ENST00000570544 333 ntBASIC15.08■□□□□ 0
CPNE3O75131 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.08■□□□□ 0
CPNE3O75131 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.08■□□□□ 0
CPNE3O75131 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms