Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMARCA5O60264 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCA5O60264 TNRC18P2-201ENST00000417666 2714 ntBASIC19.28■□□□□ 0.68
SMARCA5O60264 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 CLK3P2-201ENST00000427566 1453 ntBASIC19.28■□□□□ 0.68
SMARCA5O60264 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCA5O60264 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.27■□□□□ 0.68
SMARCA5O60264 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.27■□□□□ 0.68
SMARCA5O60264 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCA5O60264 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 INGX-202ENST00000489074 768 ntBASIC19.27■□□□□ 0.68
SMARCA5O60264 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCA5O60264 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.27■□□□□ 0.68
SMARCA5O60264 AC023310.3-201ENST00000557027 670 ntBASIC19.27■□□□□ 0.68
SMARCA5O60264 AC100756.1-201ENST00000562736 682 ntBASIC19.27■□□□□ 0.68
SMARCA5O60264 AC138749.3-201ENST00000567691 622 ntBASIC19.27■□□□□ 0.68
SMARCA5O60264 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCA5O60264 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.27■□□□□ 0.68
SMARCA5O60264 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCA5O60264 AC116165.1-201ENST00000611806 668 ntBASIC19.27■□□□□ 0.68
SMARCA5O60264 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.27■□□□□ 0.68
SMARCA5O60264 AL158212.4-201ENST00000624062 1286 ntBASIC19.27■□□□□ 0.68
SMARCA5O60264 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCA5O60264 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SMARCA5O60264 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCA5O60264 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCA5O60264 AC148477.4-201ENST00000613430 1793 ntBASIC19.27■□□□□ 0.67
SMARCA5O60264 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCA5O60264 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCA5O60264 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCA5O60264 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.26■□□□□ 0.67
SMARCA5O60264 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCA5O60264 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCA5O60264 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.26■□□□□ 0.67
SMARCA5O60264 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCA5O60264 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.26■□□□□ 0.67
SMARCA5O60264 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.26■□□□□ 0.67
SMARCA5O60264 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCA5O60264 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCA5O60264 TIMM17BP1-201ENST00000545713 516 ntBASIC19.26■□□□□ 0.67
SMARCA5O60264 AC023824.1-201ENST00000562945 2975 ntBASIC19.26■□□□□ 0.67
SMARCA5O60264 AL355385.1-201ENST00000606123 409 ntBASIC19.26■□□□□ 0.67
SMARCA5O60264 AL391069.4-201ENST00000609583 481 ntBASIC19.26■□□□□ 0.67
SMARCA5O60264 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCA5O60264 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.26■□□□□ 0.67
SMARCA5O60264 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SMARCA5O60264 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCA5O60264 BTBD7P1-201ENST00000447253 1453 ntBASIC19.26■□□□□ 0.67
SMARCA5O60264 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCA5O60264 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCA5O60264 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMARCA5O60264 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCA5O60264 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
SMARCA5O60264 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMARCA5O60264 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms