Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.21■□□□□ 0.19
MSI1O43347 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.21■□□□□ 0.19
MSI1O43347 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.21■□□□□ 0.19
MSI1O43347 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MSI1O43347 AC098614.1-201ENST00000368528 745 ntBASIC16.21■□□□□ 0.19
MSI1O43347 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 NME2P1-201ENST00000426182 414 ntBASIC16.21■□□□□ 0.19
MSI1O43347 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.21■□□□□ 0.19
MSI1O43347 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.21■□□□□ 0.19
MSI1O43347 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.21■□□□□ 0.19
MSI1O43347 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.21■□□□□ 0.19
MSI1O43347 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.21■□□□□ 0.19
MSI1O43347 AL359711.2-201ENST00000563105 872 ntBASIC16.21■□□□□ 0.19
MSI1O43347 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.21■□□□□ 0.19
MSI1O43347 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.21■□□□□ 0.19
MSI1O43347 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.21■□□□□ 0.19
MSI1O43347 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
MSI1O43347 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.21■□□□□ 0.19
MSI1O43347 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MSI1O43347 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.21■□□□□ 0.19
MSI1O43347 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MSI1O43347 AC090616.6-203ENST00000579186 1945 ntBASIC16.21■□□□□ 0.19
MSI1O43347 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MSI1O43347 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MSI1O43347 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MSI1O43347 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MSI1O43347 INTS4P2-202ENST00000614726 2019 ntBASIC16.21■□□□□ 0.18
MSI1O43347 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MSI1O43347 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
MSI1O43347 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.21■□□□□ 0.18
MSI1O43347 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.2■□□□□ 0.18
MSI1O43347 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MSI1O43347 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.2■□□□□ 0.18
MSI1O43347 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.2■□□□□ 0.18
MSI1O43347 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.2■□□□□ 0.18
MSI1O43347 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.2■□□□□ 0.18
MSI1O43347 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.2■□□□□ 0.18
MSI1O43347 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.2■□□□□ 0.18
MSI1O43347 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.2■□□□□ 0.18
MSI1O43347 AC132938.2-201ENST00000579188 680 ntBASIC16.2■□□□□ 0.18
MSI1O43347 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.2■□□□□ 0.18
MSI1O43347 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.2■□□□□ 0.18
MSI1O43347 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 AL591163.1-201ENST00000641757 987 ntBASIC16.2■□□□□ 0.18
MSI1O43347 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.2■□□□□ 0.18
MSI1O43347 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MSI1O43347 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.2■□□□□ 0.18
MSI1O43347 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
MSI1O43347 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSI1O43347 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.19■□□□□ 0.18
MSI1O43347 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.19■□□□□ 0.18
MSI1O43347 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.19■□□□□ 0.18
MSI1O43347 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
MSI1O43347 AL442647.2-201ENST00000429864 857 ntBASIC16.19■□□□□ 0.18
MSI1O43347 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.19■□□□□ 0.18
MSI1O43347 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.19■□□□□ 0.18
MSI1O43347 GAPDHP21-201ENST00000450301 1010 ntBASIC16.19■□□□□ 0.18
MSI1O43347 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.19■□□□□ 0.18
MSI1O43347 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.19■□□□□ 0.18
MSI1O43347 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms