Protein–RNA interactions for Protein: O43272

PRODH, Proline dehydrogenase 1, mitochondrial, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRODHO43272 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRODHO43272 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PRODHO43272 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRODHO43272 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PRODHO43272 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PRODHO43272 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRODHO43272 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PRODHO43272 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.24□□□□□ -0.13
PRODHO43272 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
PRODHO43272 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRODHO43272 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRODHO43272 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.24□□□□□ -0.13
PRODHO43272 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PRODHO43272 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
PRODHO43272 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.23□□□□□ -0.13
PRODHO43272 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.23□□□□□ -0.13
PRODHO43272 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PRODHO43272 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.23□□□□□ -0.13
PRODHO43272 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.23□□□□□ -0.13
PRODHO43272 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.23□□□□□ -0.13
PRODHO43272 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 AP002472.1-201ENST00000577490 586 ntBASIC14.23□□□□□ -0.13
PRODHO43272 SLC25A6P4-201ENST00000586535 553 ntBASIC14.23□□□□□ -0.13
PRODHO43272 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.23□□□□□ -0.13
PRODHO43272 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PRODHO43272 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 AC005912.2-201ENST00000619492 2400 ntBASIC14.23□□□□□ -0.13
PRODHO43272 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PRODHO43272 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRODHO43272 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 AKAP8P1-201ENST00000434743 1349 ntBASIC14.22□□□□□ -0.13
PRODHO43272 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PRODHO43272 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 RPS8P6-201ENST00000426177 609 ntBASIC14.22□□□□□ -0.13
PRODHO43272 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
PRODHO43272 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 AC034105.1-201ENST00000563488 319 ntBASIC14.22□□□□□ -0.13
PRODHO43272 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PRODHO43272 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.22□□□□□ -0.13
PRODHO43272 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRODHO43272 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms