Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
APAF1O14727 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 DFFBP1-201ENST00000433250 979 ntBASIC20.52■□□□□ 0.88
APAF1O14727 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.52■□□□□ 0.88
APAF1O14727 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.52■□□□□ 0.88
APAF1O14727 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.52■□□□□ 0.88
APAF1O14727 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.52■□□□□ 0.88
APAF1O14727 AC055876.2-201ENST00000531834 546 ntBASIC20.52■□□□□ 0.88
APAF1O14727 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
APAF1O14727 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
APAF1O14727 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
APAF1O14727 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APAF1O14727 AC023024.2-201ENST00000623561 1993 ntBASIC20.52■□□□□ 0.87
APAF1O14727 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
APAF1O14727 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
APAF1O14727 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC20.51■□□□□ 0.87
APAF1O14727 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.51■□□□□ 0.87
APAF1O14727 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.51■□□□□ 0.87
APAF1O14727 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
APAF1O14727 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.51■□□□□ 0.87
APAF1O14727 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.51■□□□□ 0.87
APAF1O14727 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.51■□□□□ 0.87
APAF1O14727 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
APAF1O14727 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.51■□□□□ 0.87
APAF1O14727 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APAF1O14727 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
APAF1O14727 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
APAF1O14727 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
APAF1O14727 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC20.5■□□□□ 0.87
APAF1O14727 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
APAF1O14727 MEP1AP4-201ENST00000423244 1087 ntBASIC20.5■□□□□ 0.87
APAF1O14727 TERF1P3-201ENST00000505638 1227 ntBASIC20.5■□□□□ 0.87
APAF1O14727 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.5■□□□□ 0.87
APAF1O14727 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.5■□□□□ 0.87
APAF1O14727 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.5■□□□□ 0.87
APAF1O14727 AC190387.1-201ENST00000551683 408 ntBASIC20.5■□□□□ 0.87
APAF1O14727 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.5■□□□□ 0.87
APAF1O14727 AC036164.1-201ENST00000570544 333 ntBASIC20.5■□□□□ 0.87
APAF1O14727 AC138761.1-201ENST00000584393 385 ntBASIC20.5■□□□□ 0.87
APAF1O14727 AC099568.2-201ENST00000609194 695 ntBASIC20.5■□□□□ 0.87
APAF1O14727 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 AP002414.2-201ENST00000591780 3365 ntBASIC20.5■□□□□ 0.87
APAF1O14727 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
APAF1O14727 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
APAF1O14727 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
APAF1O14727 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.49■□□□□ 0.87
APAF1O14727 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
APAF1O14727 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 RPL5P21-201ENST00000404620 815 ntBASIC20.49■□□□□ 0.87
APAF1O14727 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.49■□□□□ 0.87
APAF1O14727 GAPDHP40-201ENST00000505218 1006 ntBASIC20.49■□□□□ 0.87
APAF1O14727 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.49■□□□□ 0.87
APAF1O14727 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.49■□□□□ 0.87
APAF1O14727 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.49■□□□□ 0.87
APAF1O14727 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.49■□□□□ 0.87
APAF1O14727 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
APAF1O14727 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.49■□□□□ 0.87
APAF1O14727 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
APAF1O14727 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms