Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NPIPB4C9JG80 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 CICP11-201ENST00000434745 2827 ntBASIC13.8□□□□□ -0.2
NPIPB4C9JG80 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AC091951.1-201ENST00000512854 2465 ntBASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AC004890.2-204ENST00000481968 304 ntBASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AL158212.4-201ENST00000624062 1286 ntBASIC13.8□□□□□ -0.2
NPIPB4C9JG80 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 AC013726.1-201ENST00000563747 2285 ntBASIC13.8□□□□□ -0.2
NPIPB4C9JG80 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.8□□□□□ -0.2
NPIPB4C9JG80 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPB4C9JG80 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 IGHV3-42-201ENST00000520410 361 ntBASIC13.79□□□□□ -0.2
NPIPB4C9JG80 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.79□□□□□ -0.2
NPIPB4C9JG80 DUX4L27-201ENST00000554796 1261 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms