Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 AL136379.1-201ENST00000623471 2642 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 CETN4P-206ENST00000642099 2168 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AC126755.1-201ENST00000525846 6405 ntBASIC12.61□□□□□ -0.39
SRRM4A7MD48 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AL139400.1-201ENST00000366220 510 ntBASIC12.61□□□□□ -0.39
SRRM4A7MD48 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AL080243.2-201ENST00000418783 582 ntBASIC12.61□□□□□ -0.39
SRRM4A7MD48 DNAJB3-202ENST00000449667 1266 ntBASIC12.61□□□□□ -0.39
SRRM4A7MD48 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.61□□□□□ -0.39
SRRM4A7MD48 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SRRM4A7MD48 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms