Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 AL033527.4-201ENST00000641026 673 ntBASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.54■□□□□ 0.08
TBC1D3FA6NER0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 AC092933.1-201ENST00000393644 945 ntBASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 RPL7P3-201ENST00000441388 714 ntBASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 FTH1P14-201ENST00000482930 551 ntBASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 REXO1L6P-201ENST00000603433 1515 ntBASIC15.53■□□□□ 0.08
TBC1D3FA6NER0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 AC106760.1-201ENST00000508690 800 ntBASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TBC1D3FA6NER0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms