Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TNRC18P2-201ENST00000417666 2714 ntBASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MRPS18AP1-201ENST00000414458 589 ntBASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC005034.1-201ENST00000426657 489 ntBASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RN7SL618P-201ENST00000477850 296 ntBASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms