Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC106730.1-201ENST00000566722 1090 ntBASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 FAM197Y3-203ENST00000618346 717 ntBASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 GRK6P1-201ENST00000400595 1711 ntBASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC105233.2-201ENST00000523697 349 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AF228730.5-201ENST00000530288 346 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL138918.1-201ENST00000568306 659 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC073389.1-201ENST00000595595 795 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC091812.2-201ENST00000619081 385 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC134407.2-201ENST00000625089 1978 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC090616.6-203ENST00000579186 1945 ntBASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms