Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 AC022188.1-201ENST00000620960 1664 ntBASIC16.18■□□□□ 0.18
HCFC2Q9Y5Z7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 AL596087.1-201ENST00000400979 1969 ntBASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 LINC02199-201ENST00000506655 2702 ntBASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 CYP46A4P-201ENST00000414953 267 ntBASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 HINT2P1-201ENST00000419438 481 ntBASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HCFC2Q9Y5Z7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 SERPINA13P-202ENST00000478994 924 ntBASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 IMP3P2-201ENST00000489760 475 ntBASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 AC097724.1-201ENST00000609581 426 ntBASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 AC091812.3-201ENST00000621362 345 ntBASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 KRT8P14-201ENST00000414254 1442 ntBASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HCFC2Q9Y5Z7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms