Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDC42BPBQ9Y5S2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC23.02■■□□□ 1.28
CDC42BPBQ9Y5S2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC23.02■■□□□ 1.28
CDC42BPBQ9Y5S2 AL353770.1-201ENST00000614915 403 ntBASIC23.02■■□□□ 1.28
CDC42BPBQ9Y5S2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC23.02■■□□□ 1.28
CDC42BPBQ9Y5S2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 FAM90A7P-201ENST00000382628 1395 ntBASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 FAM90A23P-201ENST00000400136 1395 ntBASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 AC242376.1-201ENST00000559033 726 ntBASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 AL136295.7-201ENST00000619226 1200 ntBASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 AL157791.1-201ENST00000553667 1699 ntBASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDC42BPBQ9Y5S2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 AL627389.1-201ENST00000413508 1182 ntBASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 KLF2P1-201ENST00000447438 1042 ntBASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 TUBB8P8-201ENST00000458717 1058 ntBASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 AC005962.1-201ENST00000584100 773 ntBASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 MIR7845-201ENST00000618396 99 ntBASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CDC42BPBQ9Y5S2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 AC026434.2-201ENST00000506094 1078 ntBASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 MBLAC2-202ENST00000514906 1936 ntBASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 SNORD3B-2-202ENST00000571722 791 ntBASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 RTN3P1-201ENST00000536295 711 ntBASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDC42BPBQ9Y5S2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 NKILA-202ENST00000614771 2598 ntBASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 AC104073.2-201ENST00000453737 312 ntBASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 AC019193.1-201ENST00000506678 823 ntBASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms