Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TMBIM7P-203ENST00000641617 1718 ntBASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 AC105250.1-201ENST00000509378 2057 ntBASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 DGCR5-201ENST00000399539 862 ntBASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 GAPDHP21-201ENST00000450301 1010 ntBASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 WASH4P-201ENST00000564273 1246 ntBASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.49■□□□□ 0.39
COL4A3BPQ9Y5P4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AC063926.2-201ENST00000623766 1308 ntBASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 COX5BP8-201ENST00000416911 349 ntBASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 RARRES2P5-201ENST00000564013 466 ntBASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 RRP7BP-205ENST00000566851 833 ntBASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AC127383.1-201ENST00000444697 1800 ntBASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms