Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 AL133267.1-201ENST00000398220 340 ntBASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 AC087481.3-201ENST00000602886 1894 ntBASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGC4Q9Y5F7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 AL391825.1-201ENST00000457671 1364 ntBASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 AC087499.6-201ENST00000411576 835 ntBASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 CRB3P1-201ENST00000449338 276 ntBASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 AC036164.1-201ENST00000570544 333 ntBASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC4Q9Y5F7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PCDHGC4Q9Y5F7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AC098850.1-201ENST00000419919 790 ntBASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AC123567.1-201ENST00000548294 1261 ntBASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 LINC02084-201ENST00000606069 1096 ntBASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AC099568.2-201ENST00000609194 695 ntBASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 AL662799.1-202ENST00000614205 422 ntBASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGC4Q9Y5F7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms