Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 RN7SL828P-201ENST00000607615 303 ntBASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 AL607033.1-201ENST00000623900 1599 ntBASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 LINC00552-201ENST00000625151 2579 ntBASIC15.31■□□□□ 0.04
RNF11Q9Y3C5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 AC023141.5-201ENST00000458585 616 ntBASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 MIR4453-201ENST00000584019 89 ntBASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 AL133215.2-201ENST00000609242 977 ntBASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 AC068587.6-202ENST00000641839 5619 ntBASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF11Q9Y3C5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AC063926.3-201ENST00000624734 5658 ntBASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms