Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 BX640514.1-201ENST00000583223 1918 ntBASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 AC006504.4-201ENST00000592118 1568 ntBASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
ERGIC3Q9Y282 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 ELK2BP-201ENST00000415014 1224 ntBASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 MTDHP4-201ENST00000600287 670 ntBASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.37□□□□□ -0.11
ERGIC3Q9Y282 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 MIR1224-201ENST00000408193 85 ntBASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.36□□□□□ -0.11
ERGIC3Q9Y282 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms